Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNYIQNSGTRVIRDELQATGKVRENEDQPVENIKITNDHAFYKLICEKLVQGDFSVEQFNLLHYDISEKMIEKPFTIKEINDFCEKNDIPLFTVNELLTLVPKDDIKCYVDYETDSVRNHDHGYIADQINIKASYIKADLVNHQSYQDYITDSDTYYGFIYKKLIVSDALEKLERGETEAQIRESLGNINRKEIKELLEKVPQGSLKEWLSDPANKGYTDVEYHVLYEKISEELVHTSMSINRIKEIYDKYGIVPPTESEFESLKKVQGEKRSIEYHEQKTGLTFQGRINLNVTDNNADNEFSLNIDLFQNKNFEDLTDQNGDGVINNEGLLKSLEDTVKTFNEVFGIKKDNNPLLVYGNIANFRLFLFESKESYQKYLSGDHDAHIPGGGVAQFSDNNYISNMYSHAENARSDFNGDKEGNCKDYNYVIKHELVHALTFYLTSKLDLGKVLMEGLAEYVTHLTEGEKPADFAKLVGEEYKEHTLE-----EIIKGAVDPYQTGAAIIAYIEETYPNFIDNLLYAATEDRKTLNGRFYFKEMMQKIYQSEEDKIQKGEGFSNWVKTYSSAENITIEPGHAQHEQQAVGNEKDEAQSYSSKGQVSEDRTEVHPTGSFRGLEVPKKPVIHEQNKGQENIVLKDTILKIEKSYERDSEGKHKANVIIDYYDMKALYDRVAGAKKQSVLKFWNKLAESEYKVGALSEDKYYFKDGKFVIHDSNEKKLVVLPEDKVSIKIMKDGNHYDLAISNKEGKVISSITKIDNLNYELLLDISDFSLEAQDSTTFSDQHNEYDLYLENGLVKMFDCASDHIYHDHSLI |
3VUO Chain:A ((707-765)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TDLSKASIPPDTLKLIKETTEKTFIDLSNESQISMNRVDNFLNKASICVFVEDIYPKFISYMEKYINNINIKTREFIQRCTNINDNEKSILINSYTFKTIDFKFLNIQAIKNFFNSQVEQVMKEMLSPYQLLLFATRGPNSNIIEDISGKNTLIQYTESVELVYGVNGESLYLKSPNETVEFSNNFFTNGLTNNFTICFWLRFTGKDDDKTRLIGNKVNNCGWEIYFEDNGLVFEIIDSNGNQESVYLSNVINNNWYYISISVDRLKDQLLIFINDKNVANVSIEQILNIYSTNVISLVNKNNSIYVEELSVLDKPVASEEVIRNYFSYLDNSYIRDSSKSLLEYNKNYQLYNYVFP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VUO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52 for 216 contacts (-0.2/contact) +
2D Compatibility (PS) -5744 + (NN) -2387 + (LL) 27852
1D Compatibility (HY) -4400 + (ID) 850
Total energy: 14419.0 ( 66.75 by residue)
QMean score : 0.288
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