Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEVNILDKKWYSIVEDPKGFTLNIINASLKELKIDQYKPNISIALADDNLLHQLNLRFRQMNKPTNVLSFPCEQLSSECDL---GDIAISIDTVRKESDEYHIPIPAHVAHMLVHGLLHLLGYDHQKKGEEVVMKNLEGKILASLGYNMCAI
1XAX Chain:A ((40-146))
----------------------------------------EMTVRIVDEAESHELNLTYRGKDRPTNVLSFPFE-CPDEVELPLLGDLVICRQVVEREASEQEKPLMAHWAHMVVHGSLHLLGYDHIEDDEAEEMESLETQIMQGLGF-----
General information:
TITO was launched using:
RESULT:
Template:
1XAX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58600 for 694 contacts (-84.4/contact) +
2D Compatibility (PS) -10770 + (NN) -4788 + (LL) 3652
1D Compatibility (HY) -8800 + (ID) 2350
Total energy: -81656.0 ( -117.66 by residue)
QMean score : 0.342
(partial model without unconserved sides chains):
PDB file :
Tito_1XAX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XAX-query.scw
PDB file :
Tito_Scwrl_1XAX.pdb
: