Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAYPDFTLENKLSGVIAGVDEVGRGPLAGPVMSAAVVFTNRNIIIEGINDSKKLTAKNRQVLYEKIISVAKFGIGMASVAEINSYNILQATKLSMERALVNLGIELDYVLVDGNQPPKVKWQVKSIVKGDSLSVSVAAASIVAKVARDQLMQELHNQYPEYNWYKNKGYGTKGHIDAINLYGVTEHHRKSFAPILNSTKRALL
3O3G Chain:A ((11-196))
-------------GIVAGVDEAGRGCLAGPVVAAAVVLEKE---IEGINDSKQLSPAKRERLLDEIMEKAAVGIGIASPEEIDLYNIFNATKLAMNRALENLSVKPSFVLVDG-KGIELSVPGTCLVKGDQKSKLIGAASIVAKVFRDRLMSEFHRMYPQFSFHKHKGYATKEHLNEIRKNGVLPIHRLSFEPVLELLTDDLL
General information:
TITO was launched using:
RESULT:
Template:
3O3G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86300 for 1580 contacts (-54.6/contact) +
2D Compatibility (PS) -20591 + (NN) -11748 + (LL) 1072
1D Compatibility (HY) -17200 + (ID) 4750
Total energy: -139517.0 ( -88.30 by residue)
QMean score : 0.385
(partial model without unconserved sides chains):
PDB file :
Tito_3O3G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O3G-query.scw
PDB file :
Tito_Scwrl_3O3G.pdb
: