Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNIIHPNLEKSINNWFETQFNSLTLPFYNSIDLRNSGYKIAPIDANLFPAGFNNLSE--MSKATTAELMRSYFEGKQHKRVLIIPENYTRNKMYIENVFAIEVILQQAGFETRIGLF------------HNEAYNLIEPYETIVKENSLLKTTSGFMPDVIILNRDMTSHIPDMLENVKQEIIPSPLYGWHSRQKFKYFKIYKKLVSEFCSEFKIDPWLISAFTEGCDEVDFNDDSPLETVATKVDQVLSLVQKKYEEYGIKTQPYVFIKASNGTYGMGIITATSGEEILTLNKKKRHKMKKIKEGIEVNSVIIQEGVPTIDIFECSPAEPLIYYIGNTPTCYLYRCNSRKDIYSSLNS-----------TNCKFYDVSQVVENKT--LSLWGTVSKLAVLALAVEMRSFHI |
| 3K1T Chain:A ((29-421)) | ------------IEHWFRSQWQEYGAPFYASVDLRNAGFKLAPVDTNLFPGGFNNLNPDFLPLCIQAAMVAVEKICPDARRLLLIPENHTRNTFYLRNVHALTHILRQAGLEVRIGSIAPEITAPTFLETHDGHSILLEPVRR--KANRL--ELDNFDSCAILLNNDLSGGIPDILQGLEQSLIPPLHAGWATRRKSNHFTAYDRVVEEFAPLIDIDPWLLNPYFDTCGGLDFHARLGEEQLAEKVDSLLAKIRRKYAEYGVKQEPFVIVKADAGTYGMGIMTVKSADDVRDLNRKQRNKMSVVKEGLKVSEVILQEGVYTFEHLKDAVAEPVIYMMDHFVVGGFYRVHTSRGADENLNAPGMHFEPLTFETPCSTPDCAGAPDAAPNRFYAYGVVARLALLAATIELQETD- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K1T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154293 for 2859 contacts (-54.0/contact) +
2D Compatibility (PS) -39003 + (NN) -17182 + (LL) 1404
1D Compatibility (HY) -31600 + (ID) 7300
Total energy: -247974.0 ( -86.73 by residue)
QMean score : 0.455
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