Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVFVMQLQSNLKSIEELISQSRWSYKKPRTVNYRYNQDKLMHRLGDILVQYGIQHDTGLLPHEWHYHISPRGKADIVQHNRDGQPIYVSLSYSYPYIVCVVDKEPVGIDIEKISQRLDWRTLVTCFSTNEAHQICSLND------FYQIWTQKESFTKLIGEGLIKGLDIYDMTQSHFYQSREVKFKQFIFDQFMVQVCFLGEAPWGYKKVSVFQLLSS |
4MRT Chain:A ((28-168)) | --------------------------KREKCRRFYHKEDAHRTLLGDVLVRSVISRQYQLDKSDIRFSTQEYGKPCIP----DLPDAHFNISHSGRWVIGAFDSQPIGIDIEK-TKPISLEIAKRFFSKTEYSDLLAKDKDEQTDYFYHLWSMKESFIKQEGKGLSLPLDSF------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MRT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46623 for 873 contacts (-53.4/contact) +
2D Compatibility (PS) -14376 + (NN) -4037 + (LL) 7244
1D Compatibility (HY) -4800 + (ID) 1950
Total energy: -64542.0 ( -73.93 by residue)
QMean score : 0.155
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