Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRQIKVVLIGGGTGLSVMARGLREFPIDITAIVTVADNGGSTGKIRDEMDIPAPGDIRNVIAALSDSESVLSQLFQYRFEENQISGHSLGNLLIAGMTNITNDFGHAIKALSKILNIKGRVIPSTNTSVQLNAVMEDGEIVFGETNIPKKHKKIDRVFLEPNDVQPMEEAIDALREADLIVLGPGSLYTSVISNLCVNGISDALIHSDAPKLYVSNVMTQPGETDGYSVKDHIDAIHRQAGQPFIDYVICSTQTFNAQVLKKYEEKHSKPVEVNKAELEKESINVKTSSNLVEISENHLVRHNTKVLSTMIYDIALELISTIPFVPSDKRK |
| 2PPV Chain:A ((3-327)) | -KQMNVVLIGGGTGLSVLARGLREFPIDITAIVTVADNGGSTGKIRDVMDIPAPGDIRNVIAALSDSESILTQLFQYRFGENQVDGHSLGNLVIAGMTNITNDFGHAIKELSKVLNIKGQVIPSTNASVQLNAVMEDGEIVHGETNIPKTHKKIDRVFLEPSDVEPMNEAIEALEQADLIVLGPGSLYTSVISNLCVKGISEALLRTSAPKLYVSNVMTQPGETDNYDVKEHIDALTRQVGEPFIDFVICSSESYSKDVLQRYEEKNSKPVAVHKEQLKDSGIRVLTASNLVEISNEHYVRHNTKVLSKMIYELALELTSTIRFTP----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PPV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -228166 for 2814 contacts (-81.1/contact) +
2D Compatibility (PS) -35703 + (NN) -18949 + (LL) 332
1D Compatibility (HY) -43200 + (ID) 12900
Total energy: -338586.0 ( -120.32 by residue)
QMean score : 0.650
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