Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMSRLNSVVIKLWLTIILIVTTVLILLSIALITFMQYYFTQETENAIREDARRISSLVEQSHNKEEAIKYSQTLIENPGGLMIINNKHRQSTASLSNIKKQMLNEVVNNDHFDDVFDKGKSVTRNVTIKEKGSSQTYILLGYPTKAQKNSHSKYSGVFIYKDLKSIEDTNNAITIITIITAVIFLTITTVFAFFLSSRITK---PLRRLRDQATRVSEGDYSYKPSVTTKDEIGQLSQAFNQMSTEIEEHVDALSTSKNIRDSLINSMVEGVLGINESRQIILSNKMAN-------------DIMDNIDEDAKAF--LLRQIEDTFKSKQTEMRD-LEMNARFFVVTTSYIDKIEQGGKSGVVVTVRDMTNEHNLDQMKKDFIANVSHELRTPISLLQGYTESIVDGIVTE---PDEIKESLAVVLDESKRLNRLVNELLNVARMDAEGLSVNKEVQPIAA----LLDKMKIKYRQQADDLGLNMTFNYCKKRVW-SYDMDRMDQVLTNLIDNASRYTKPGDEIAITCDENESEDILYIKDTGTGIAPEHLQQVFDRFYKVDAARTRGKQGTGLGLFICKMIIEEHGGSIDVKSELGKGTTFIIKLPKPE |
| 4I5S Chain:A ((37-432)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NNNQVKQLNAKVRSLITGHYTDKLKVEDNSDLSELVNNVNDLSEVFRLTHENLAQEKNRLTSILSYMTDGVLATDRSGKITVINDMAQKQLNVTREQALECNILDILDDDSYTYNDLITKTPEIVLTRRDEYDEFITLRIRF------ALNRRESGFISGLIAVLHDATEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDDGALTESVAPSFIK----VSLDETNRMMRMITDLLSLSR-----SHLDVELTNFTAFMNYILDRFDQIQSQQST----EIIRDYPDKSVWIEIDTDKMTQVIDNILNNAIKYSPDGGKVTITMQTTDTQLILSISDQGLGIPKKDLPLIFDRFYRVDKAR-------GLGLAIAKEIVKQHKGFIWANSEEGEGSTFTIVLP--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4I5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -65216 for 2382 contacts (-27.4/contact) +
2D Compatibility (PS) -37104 + (NN) -11158 + (LL) 18108
1D Compatibility (HY) -24400 + (ID) 6050
Total energy: -125820.0 ( -52.82 by residue)
QMean score : 0.396
|
|
|