Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRKESRVQAFQTLFQLEMKD-SDLTINEAISFIKDDNPDLD--FEFIHWLVSGVKDHEPVLDETISPYLKDWTIARLLKTDRIILRMATYEILH-SDTPAKVVMNEAVELTKQFSDDDHYKFINGVLSNIKK
1EYV Chain:A ((9-138))
-GRHQARKRAVALLFEAEVRGISAAEVVDTRAALAEAKPDIARLHPYTAAVARGVSEHAAHIDDLITAHLRGWTLDRLPAVDRAILRVSVWELLHAADVPEPVVVDEAVQLAKELSTDDSPGFVNGVLGQV--
General information:
TITO was launched using:
RESULT:
Template:
1EYV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72474 for 938 contacts (-77.3/contact) +
2D Compatibility (PS) -13382 + (NN) -5781 + (LL) 336
1D Compatibility (HY) -7600 + (ID) 2200
Total energy: -101101.0 ( -107.78 by residue)
QMean score : 0.492
(partial model without unconserved sides chains):
PDB file :
Tito_1EYV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EYV-query.scw
PDB file :
Tito_Scwrl_1EYV.pdb
: