Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKAEIKGVIVSNEDKWVYEMLG--MDSTCPKDVLTQLEF-----SDEDVDIIINSNGGNLVAGSEIYTHLRAHKGKVNVRITAIAASAASLIAMAGDHIEMS--PVARMMIHNPSSIAQGEAKDL---NHAAETLEHVGQIMAEAYAVRAGKNKQELVEMMARETWLNADEAIEQGFADSKMFENDNMQIVASNTQVLSKDVLNRVTALVSKTPEVNIDIDAIANKVIEKINMKEKESEIDVADSKVSANGFSRFLF |
4EMM Chain:V ((31-190)) | -------------------MLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPL----------IAANHILKTREKLNRILSE----RTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVM--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EMM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80722 for 1033 contacts (-78.1/contact) +
2D Compatibility (PS) -15260 + (NN) -6964 + (LL) 8716
1D Compatibility (HY) -8400 + (ID) 2450
Total energy: -105080.0 ( -101.72 by residue)
QMean score : 0.556
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