Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVLFLSIFKKSFNDFLSARMLLINLGPILLSLAFFGAIFYYNGGSIVNYCQTLLPQSLNDYAHSQGFFAGVFAWVFKALVYFLIFWIVILLSLVINIFASIFYTPLVVSYLHQKYYPHVVLEEFGSILFSIKYFLKSLTFMLLFLAVLTPLYFIPFIGVFGVFFSIVPHFLFFKNTMSLDIASMIFNHQSYQNLLKQHRLKHYRFSFFCYLFSLIPFFNFFATLLQTLMLTHYFFIFKEKEC |
| 4AF3 Chain:D ((17-41)) | -------------------------------------------------------------------------------------------------------TPLSQAIIHQYYHPPNLLELFGTILPLDLEDIFK--------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4AF3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -1997 for 83 contacts (-24.1/contact) +
2D Compatibility (PS) -2398 + (NN) 806 + (LL) 19616
1D Compatibility (HY) -2000 + (ID) 650
Total energy: 13377.0 ( 161.17 by residue)
QMean score : -0.101
|
|
|