Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLQRPKIVAELSANHNQDLNLAKESLHAIKESGADFVKLQTYTPSCMTLDSKEDPFIIQGTLWDKENLYGLYQKASTPLEWHAELFELAKKLDLGIFSSPFSSKALELLESLDCPMYKIASFEIVDLDLIEKAARTQKPIILSSGIATHAELQDAISLCRGVNNFDITLLKCVSAYPSKIEDAHLLSMVKLGETFG-VKFGLSDHT-IGSLCPILATTLGASMIEKHFILNKSLQTPDSAFSMDFNGFKSMVGAIKQSVLALGEEEPK-INPKTL------------EERRFFARSLFVIKDIQKGEALTSDNIKALRPN---LGLHPKFYKEIL--GQKASKFLKANTPLSADDIERAL |
| 1VLI Chain:A ((31-376)) | ------IIAEAGINHDGKLDQAFALIDAAAEAGADAVKFQMFQ---ADRMYQKDP---------DVSIFSLVQSMEMPAEWILPLLDYCREKQVIFLSTVCDEGSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPMIFSTAGAEISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEAVIGFSDHSEHPTEAPCAAVRLGAKLIEKHFTIDKNLPGADHSFALNPDELKEMVDGIRKTEAELKQGITKPVSEKLLGSSYKTTTAIEGEIRNFAYRGIFTTAPIQKGEAFSEDNIAVLRPGQKPQGLHPRFF-ELLTSGVRAVRDIPADTGIVWDDILLKD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VLI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144073 for 2593 contacts (-55.6/contact) +
2D Compatibility (PS) -34149 + (NN) -18301 + (LL) 1276
1D Compatibility (HY) -17200 + (ID) 5500
Total energy: -217947.0 ( -84.05 by residue)
QMean score : 0.525
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