Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRLILFNRNAFLLACMFVSSVYANAVLDAYAVENPYITITLTSLLAPLSMLAFLKTPRNSAFALGFFVGALLFYWCALSFRYSDFTYLLPLIIVLVALVYGVLFYLLLYFENPYFRLLSFLGSSFIHPFGFDWLVPDSFFSYSVFRVDKLSLGLIFLACIFLSAQNLKKYRMIGVLLLLGALDFHFFKISDLKEVGNIELVSTRTPQDLKFDSNYLNNIENNILKEIKLAQSKQKTLIVFPETAYPIALENSPFKTQLEDLSDKIAILIGTLRAQGYSLYN-SSFLFSKKSVQIADKVILAPFGEIMPLPEFLQKPLEKLFFGESAYLYRNAPHFSDFTLDDFTFRPLICYEGTSKPAYSSSPSKVFILMSNNAWFSPSIEPTLQRTLLKYYARRYDKIILHSANFSTSYILSPSLLGDILFRKRS |
1C7I Chain:A ((281-330)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PKTLPEEPEKSIAEGAASGIPLLIGTTRDEGYFFFTPDSDVYSQETLDAALEYLLGKPLAEKVADLYPRSLESQIHMVTDLLFWRPAVAFASAQSHYAPVWMYRFDWHPEKPPYNKAFHTLELPFVFGNLDELERMAKAEITDEVKQLSHTIQSAWTTFAKTGNPSTEAVNWPAYHEESRE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1C7I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2751 for 175 contacts (15.7/contact) +
2D Compatibility (PS) -5131 + (NN) -1073 + (LL) 21188
1D Compatibility (HY) -1600 + (ID) 800
Total energy: 15335.0 ( 87.63 by residue)
QMean score : 0.036
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