Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLEKLIERVLFATRWLLAPLCIAMSLVLVVLGYVFMKELWHMLSHLDTISETDLVLSALGLVDLLFMAGLVLMVLLASYESFVSKLDKVDASEITWLKHTDFNALKLKVSLSIVAISAIFLLKRYMSLEDVLSSIPKDTPLSHNPIFWQVVIHLVFVCSALLTAVTNNIAFSQKERH |
| 4DOJ Chain:A ((423-521)) | ------------------------------------------------------------------IMGIIAMILLGTF--FITSADSASTVMGTMSQHGQLEANKWVTAAWGVATAAIGLTLLLSGGDNALSNLQNVTIVAATP-FLFVVIGLMF---ALVKDLSNDVIYLEYREQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DOJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -23458 for 466 contacts (-50.3/contact) +
2D Compatibility (PS) -9914 + (NN) 793 + (LL) 8052
1D Compatibility (HY) -7200 + (ID) 1400
Total energy: -33127.0 ( -71.09 by residue)
QMean score : 0.012
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