Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAQLRFTGVGGQGVLLAGEILAEAKIVSGGYGTKTSTYTSQVRGGPTKVDILLDKDEIIFPYAKEGEIDFMLSVAQISYNQFKSDIKKGGIVVIDPNLVTPTKEDEEKYQLYKIPIISIAKDEVGNIITQSVVALAITVELTKCVEENIVLDTMLKKVPAKVAETNKKAFEIGKKHALEALKK
3G2E Chain:A ((3-183))
LKYQLRFGGE--QGVITAGEILAEAAIKEGRQAFKASTYTSQVRGGPTKVDIIIDDKEILFPYAVEGEVDFMLSTADKGYKGFRGGVKEGGIIVVEPNLVHPESEDYKKWQIFEIPIITIAKDEVGNVATQSVVALAIAAYMSKCIDLDVLKETMLHMVPAKTRDANAKAFDLGVKYATQAKPH
General information:
TITO was launched using:
RESULT:
Template:
3G2E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96419 for 1365 contacts (-70.6/contact) +
2D Compatibility (PS) -19328 + (NN) -9035 + (LL) -344
1D Compatibility (HY) -17200 + (ID) 5250
Total energy: -147576.0 ( -108.11 by residue)
QMean score : 0.634
(partial model without unconserved sides chains):
PDB file :
Tito_3G2E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G2E-query.scw
PDB file :
Tito_Scwrl_3G2E.pdb
: