Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRSWMKKKYFTLLLQSSVVLAVFIGCSSTRNHTFSALSNQENTDDKLPVVHSIKTINDVSSVGFEWSKVADTYDIDGFVLYRLKKDSKLKRIATIKNPYATHYYDEGLETESSYTYQLATYKGDKISKLSEPILVKTSFINPVESVFASLEYPKSVKVFWSPHPNPSVSKYIIQRQNKDGKFLNVGAVKNRLFVEFFDKDLEDGQKYRYQIIAENFMGDKSRPSVIVEGKTKDLPKEIANVRVSQNLTRQIELSWDKSPEEDVIAYRI-YASNNRNDKYKFIAQTTNTSYVDKIEKDNLTRY----YKVVAVDKTHLEGALPKEPAMGETSDRPEAPIITKGTIQ-----DSSALIQWE--NNPSPKIATYAVYRFEANSKTPLRFGNITQNQFVDKDMKVGVAYRYQVVSVDKDGLESHPSKEVRLFLER |
| 4YH7 Chain:A ((276-434)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QSANYTCVAMSTLGVIE---AIAQITVKALPKPPGTPVVTESTATSITLTWDSGNPEPVSYYIIQHKPKNSEEPYKEIDGIATTRY----SVAGLSPYSDYEFRVVAVNNIGRGPA--SEPVLTQTSE--QAPSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVIT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YH7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13912 for 811 contacts (17.2/contact) +
2D Compatibility (PS) -15074 + (NN) -3742 + (LL) 13212
1D Compatibility (HY) -7200 + (ID) 2300
Total energy: -1192.0 ( -1.47 by residue)
QMean score : 0.311
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