Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKKRKRPQSGKIDRVDC---------LEKLGKENT-TFLSSIAMGSIGQLAIPIP-----GVG-VLIGGFVGGVMSKTFYDVSLTIFKEAKLARQRRIEIEKECRESIRQLEMYQNQFNEVFERYFHGTIKFFNESFDELERALCAGDADLAIAVNNKIQEGMGQELLFDNKQECWEFITSRKEGWNFITSRGKTEI |
1A27 Chain:A ((72-154)) | VAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTTERFLPLLRMRLDD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1A27.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12030 for 296 contacts (-40.6/contact) +
2D Compatibility (PS) -7072 + (NN) -131 + (LL) 0
1D Compatibility (HY) -6000 + (ID) 1250
Total energy: -26483.0 ( -89.47 by residue)
QMean score : 0.062
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