Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPLTHLNEENQPKMVDIGDKETTERIALASGRISMNKEAYDAIINHGVKKGPVLQTAIIAGIMAAKKTSELIPMCHPIMLNGVDIDILEEKETCSFKLY--ARVKTQAKTGVEMEALMSVSIGLLTIYDMVKVIDKSMTISGVMLEHKSGGKSGDYNAKK
2EEY Chain:A ((4-160))
--FTHFNEQGRAKMVDITHKEDTVRVAVAQTSVTVSREIYEKMTSNAIEKGDVLAVAQVAGVMAAKKTADLIPMCHPLMLKGVDIAFAWENDGEAHKLVITATVKTKGSTGVEMEALTAASVCALTVYDMCKALDKGMVIGPTYLVEKTGGKSGHYRRKT
General information:
TITO was launched using:
RESULT:
Template:
2EEY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67174 for 1122 contacts (-59.9/contact) +
2D Compatibility (PS) -16334 + (NN) -2649 + (LL) 68
1D Compatibility (HY) -14000 + (ID) 3900
Total energy: -103989.0 ( -92.68 by residue)
QMean score : 0.421
(partial model without unconserved sides chains):
PDB file :
Tito_2EEY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EEY-query.scw
PDB file :
Tito_Scwrl_2EEY.pdb
: