Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRMKPIFLLIFLLLASLIAREKDASSNLFDLIDKGINREQELKEQEQKTRLKLAQSPLVALEIVPQETPYLEWQGARESYYLKVSAVVESVVILKIDINQGRSCSLYPTPKSVSLVRNQSVAYEILCENQPLWIEVSTNLGKRTFQF
5A55 Chain:A ((695-747))
----------------------------LYKLTDQGKTEEQELTVKDGKITLDLLANQPYVLYRSKQTNPEMSWSEGMHIYDQGFNSGTLKHWTISGDASKAEIVKSQGANDMLRIQGNKEKVSLTQKLTGLKPNTKYAVYVGVDNRS
General information:
TITO was launched using:
RESULT:
Template:
5A55.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6813 for 219 contacts (-31.1/contact) +
2D Compatibility (PS) -5200 + (NN) 4245 + (LL) 2752
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -7816.0 ( -35.69 by residue)
QMean score : 0.233
(partial model without unconserved sides chains):
PDB file :
Tito_5A55.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5A55-query.scw
PDB file :
Tito_Scwrl_5A55.pdb
: