Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MWITQEITPYLRKEYTIEAKLLDVRSEHNILEIFKSKDFGEIAMLNRQLLFKNFLHIESELLAHMGGCTKKELREVLIVDGFDLELAHQLFKYDTRIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLILCLQEPDIHKIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNLGDFFPITIPFVAPLRILSNKGYIYASFKTHPLKDLMTPKIEALKSVRYYNEDIHRAAFALPKNLQEVFKDNIKS |
2CMG Chain:A ((1-262)) | MWITQEITPYLRKEYTIEAKLLDVRSEHNILEIFKSKDFGEIAMLNRQLLFKNFLHIESELLAHMGGCTKKELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIFCLQEPDIHRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFSVAMPFVAPLRILSNKGYIYASFKTHPLKDLMTPKIEALTSVRYYNEDIHRAAFALPKNLQEVFKDNIKS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CMG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161440 for 2132 contacts (-75.7/contact) +
2D Compatibility (PS) -27945 + (NN) -1689 + (LL) 0
1D Compatibility (HY) -42000 + (ID) 12500
Total energy: -245574.0 ( -115.18 by residue)
QMean score : 0.459
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