Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRYIDDGLENQTILITGGAGFVGSNLAFYFQENHPKAKVVVLDKFRSNTLSSNNRPSSLGHFKNLIGFKGEVIIADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGNTKAPNIVGSNESPENVYGFSKLCMDEFVLSHSSDNV-VGLRYFNVYGSREFYKEKTASMVLQLALSAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQKSGVYNVGYSQARSYNEIVSILKEHLGDFKVSYIKNPYTFFQKHTQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAIFKEQHA |
3SXP Chain:A ((1-324)) | MRYIDDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSN-------PSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQKSGVYNVGYSQARSYNEIVSILKEHLGDFKVTYIK-------KHTQAHIEPTILDLDYTPLYDLESGIKDYLPHIHAI------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SXP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179027 for 2732 contacts (-65.5/contact) +
2D Compatibility (PS) -32978 + (NN) -12570 + (LL) 1028
1D Compatibility (HY) -46000 + (ID) 15000
Total energy: -284547.0 ( -104.15 by residue)
QMean score : 0.553
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