Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTLGLSSLGGTLEFYDFIIFVFFTSIIAKHFF-PNTLSPIWSEINTYGIF--AAGYLARPLGGIVMAHFGDKFGRKNMFMLSILLMVIPTFALALMPTFNDLVGFGVDSMGLTPKNAH-----YLGYIAPVFLVLVRICQGVAVGGELPGAWVFVHEHAPQGQKNTYIGFLTASVVSGILLGSLVYIGIYMVFDKPVVEDWAWRVAFGLGGIFGIISVYLRRFLEETPVFQQMKQDDALVKFPLKEVFKNSLFGISIS---------MLITWVLTACILIFILFVPNFTLTHPNFHFTPFEKTYFQILG-----LVGIVSS--IIFTGFLADKI--KPHKVCMAFSAAFGFFGFLFFKEFYSNAPSLVNTI-ILYFLACFCAGIMNFCPIFMSDVFSARIRFSGISFAYNIAYAITAGFTPQLSSWLNAKAIAVPESLQSYGLSFYILIVSLIAFITSLLMAPIYHKSNTQHEVSPTA |
| 4JA4 Chain:A ((16-411)) | -----VATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSE--SAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISG------------VGSAWPELGFTSINPDNTVPVYLAGYVPEF-VIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLM----QEQAEGILRKIMGNTLATQAVQEIKHSLDHG--MFGVGVIVIGVMLSIFQQFVGINVVLYYAP---EV-----LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFS--LGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWE-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JA4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -288376 for 2673 contacts (-107.9/contact) +
2D Compatibility (PS) -33788 + (NN) 3050 + (LL) 4528
1D Compatibility (HY) -29200 + (ID) 4200
Total energy: -347986.0 ( -130.19 by residue)
QMean score : 0.143
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