Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTINQLIRKERKKVVKKTKSPALVECPQRRGVCTRVYTTTPKKPNSALRKVAKVRLTSKFEVISYIPGEGHNLQEHSIVLVRGGRVKDLPGVKYHIVRGALDTAGVNKRTVSRSKYGTKKAKATDKKATDNKKK
4OX9 Chain:L ((2-125))
-PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPKEA----------
General information:
TITO was launched using:
RESULT:
Template:
4OX9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21545 for 803 contacts (-26.8/contact) +
2D Compatibility (PS) -13404 + (NN) -2948 + (LL) 492
1D Compatibility (HY) -9600 + (ID) 4700
Total energy: -51705.0 ( -64.39 by residue)
QMean score : 0.487
(partial model without unconserved sides chains):
PDB file :
Tito_4OX9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OX9-query.scw
PDB file :
Tito_Scwrl_4OX9.pdb
: