Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFNKVIMVGRLTRNVELKYLPSGSAAATIGLATSRRFKKQDGTLGEEVCFIDARLFGRTAEIANQYLSKGSSVLIEGRLTYESWMDQTGKKNSRHTITADSLQFMDKKSDNPQANSMQDSMTHENFNNAYPTNYNAPSQDPFSQAQSYPQNAYTKENSQAQPSKYQNSVPEINIDEEEIPF
2VW9 Chain:A ((1-109))
MFNKVIMVGRLTRNVELKYLPSGSAAATIGLATSRRFKKQDGTLGEEVCFIDARLFGRTAEIANQYLSKGSSVLIEGRLTYESWMDQTGKKNSRHTITADSLQFMDKKS------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2VW9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33063 for 784 contacts (-42.2/contact) +
2D Compatibility (PS) -11663 + (NN) -2418 + (LL) 2444
1D Compatibility (HY) -14000 + (ID) 5400
Total energy: -64100.0 ( -81.76 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_2VW9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VW9-query.scw
PDB file :
Tito_Scwrl_2VW9.pdb
: