Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATKKTKKNKEKKQALENPLKGLYLSLRLKAFITDIFMIYTPMLYIMTYAILGSAKDFRENQSAIFLCLLFYALTHSFFIAFKSQSPGMRYARFKLVKNNGEKVDFFLALWRFV-LWVLSMGLLVGFVAPFIFKFFLHDKFSSTHIEIIKEEI
1IZL Chain:A ((261-290))
-----------------------------------------------------------------------------------------QYASF----NNSRSLHFFLAAWRVVGVWFAALGISTMAFNLNGFNFNHSVIDAKGNVINTWADI
General information:
TITO was launched using:
RESULT:
Template:
1IZL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5119 for 106 contacts (-48.3/contact) +
2D Compatibility (PS) -3076 + (NN) -3134 + (LL) 8236
1D Compatibility (HY) -4800 + (ID) 700
Total energy: -8593.0 ( -81.07 by residue)
QMean score : -0.202
(partial model without unconserved sides chains):
PDB file :
Tito_1IZL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IZL-query.scw
PDB file :
Tito_Scwrl_1IZL.pdb
: