Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKKEERLGVLLWFRFSRFYNRNMKLTNQNLRAAGISTAQFDCIAQIGLDKEITQQQLAEKLVVTKGNVTQLLAKLEQLGYITRTKTG---REKHITLTEKGQACYRENVPKQEAFQQAQFDKLTRDEQKELLKLLKKLGE
2A61 Chain:A ((27-135))
------------------------------LRDFGITPAQFDILQKIYFEGPKRPGELSVLLGVAKSTVTGLVKRLEADGYLTRTPDPADRRAYFLVITRKGEEVIEKVIERRENFIEKITSDLGKEKSSKILDYLKEL--
General information:
TITO was launched using:
RESULT:
Template:
2A61.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36677 for 673 contacts (-54.5/contact) +
2D Compatibility (PS) -11606 + (NN) -4950 + (LL) 2532
1D Compatibility (HY) -9600 + (ID) 1700
Total energy: -62001.0 ( -92.13 by residue)
QMean score : 0.749
(partial model without unconserved sides chains):
PDB file :
Tito_2A61.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A61-query.scw
PDB file :
Tito_Scwrl_2A61.pdb
: