Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MISYGELIRQIRQSKKISQKEVYTGVISKSYAIEFEKGTHAISSLLLEKIVAKLMVSMEEFFLMYHQEALPEKEDFWEAYARTCKTDEASAWESLYQKISLEKGKVNQVKSAAIKLELDHIKGKQVADKKAVQILENYLIEAVFWTLQDIFLF---TRMMHY-----LPLKSRVPFYYKLLNTLDRYRHFERGRSISQSALASIMDDFIEKNEIEYMELMIKSLEKISEDCDGTYSKILCMYYRGIVRWREGEKREGSEEIEQAVAILRALGYENKAAEYETMYRQFARENNDIKTME |
| 4YV9 Chain:A ((6-272)) | ----GKTLRRLRQGKQVSISSL----LSKSQISRFERGESEISCSRLLNLLDKLNITIDEFVST---------THFFTLLSRVRKYYAEKNVAKLLKL--LEDYAHKDYESTMIKAILSSIEPTVEPSEEEVTRLTDYLFSVEQWGYYEIILLGNCSRFINYNTLFLLTKEMVTSFAYSEQNKTNK-------TLVTQLSINCLIIS-IDYSYFDHSHYLIEKIEFLLRDELNFYEKTVFLYVHGYYKLKQGQV-SGKDDMRQALQIFKYLGEDALYYSYKEHYRK------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YV9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17981 for 1658 contacts (-10.8/contact) +
2D Compatibility (PS) -26294 + (NN) -5906 + (LL) 2980
1D Compatibility (HY) -1600 + (ID) 1750
Total energy: -50551.0 ( -30.49 by residue)
QMean score : 0.257
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