Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKMGFIGNGKSTNRYHLPFILER-DNIEVKTIYNRNPKTATWDKI-EGVHYTTDLDELLKDPEIQLITISTTQSSHFDYAKMVLENGKNVLVEKPFMMTYAEAKEIFELAKERGLLVQCYQNRRFDSDFLTAQKVIESGKLGELLEVEMHYDYFRPEIPESVHEFKFYDSYLYGHGCHTIDQVLSYFGKPDNIHYDVRQLLGEGRMNDYFDLDLYYGVTKVSVKSSYFRIKARPSFVLYGKKGTFTKETKDRQEEHLKLFYMPSNPDFGIDLPEHYGTLTYVDDAGVWHEEKVISEVGDYGRVYDDLYEAIINGKPKQVTDEETLLQMEILEKGVEACK |
3F4L Chain:A ((2-334)) | VINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSHFEYAKRALEAGKNVLVEKPFTPTLAQAKELFALAKSKGLTVTPYQNRRFDSCFLTAKKAIESGKLGEIVEVESHFDYYRP-VAETKPGLP-QDGAFYGLGVHTMDQIISLFGRPDHVAYDIRSLRNKANPDDTFEAQLFYGDLKAIVKTSHLVKIDYPKFIVHGKKGSFIKYGIDQQETSLKANIMPGEPGFAAD--DSVGVLEYVNDEGVTVREEMKPEMGDYGRVYDALYQTITHGAPNYVKESEVLTNLEILERGFE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F4L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49553 for 2641 contacts (-18.8/contact) +
2D Compatibility (PS) -35382 + (NN) -13534 + (LL) 356
1D Compatibility (HY) -12400 + (ID) 5400
Total energy: -115913.0 ( -43.89 by residue)
QMean score : 0.367
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