Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNILLVCNAGMSTSFLVEKMKAAGTEQGVEANIWAVSDAELHENWEKADVILLGPQVGYLKGNTEKVVGGK-IPVEVINMLDYGRVNGAAVLERAIELIG
4MGE Chain:A ((2-98))
--NILLCCSAGMSTSLLVTKMEAAAKARGLEGKIWAVSGDAVKTNIDQADVLLLGPQVRYMLSSMKTLADERNVGIDVINPMHYGMMNGEAVLDHALTL--
General information:
TITO was launched using:
RESULT:
Template:
4MGE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79752 for 741 contacts (-107.6/contact) +
2D Compatibility (PS) -10338 + (NN) -1654 + (LL) 304
1D Compatibility (HY) -13200 + (ID) 2350
Total energy: -106990.0 ( -144.39 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_4MGE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MGE-query.scw
PDB file :
Tito_Scwrl_4MGE.pdb
: