Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIFCGIMSIQAGFIGALAEILSPDSKKNNLFMIP---EDLAASSGYLMSLAMVLAGILIICAYRNDFLIFMALILWLFGLIFGLIFTPSYSGFYFRPIVCLISFLMGLFIFTDYTRHQDTGEER
3G06 Chain:A ((383-446))
----------------GLKELIVSGNRLTSLPVLPSELKELMVSGNRLTSLPMLPSGLLSLSVYRNQL---------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3G06.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21510 for 275 contacts (-78.2/contact) +
2D Compatibility (PS) -4645 + (NN) 3644 + (LL) 6316
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -20945.0 ( -76.16 by residue)
QMean score : 0.034
(partial model without unconserved sides chains):
PDB file :
Tito_3G06.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G06-query.scw
PDB file :
Tito_Scwrl_3G06.pdb
: