Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKPIEEIGEEIGAKVEKVARKTGNVAGTAAKLSVYSSIWAVKTGVNKTRAFAQ--GFKQGWSGK
3RTK Chain:A ((61-118))
LEDPYEKIGAEL---VKEVAKKTD-------TTATVLAQALVREGLRNVAAGANPLGLKRG----
General information:
TITO was launched using:
RESULT:
Template:
3RTK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7868 for 261 contacts (30.1/contact) +
2D Compatibility (PS) -4941 + (NN) 730 + (LL) 480
1D Compatibility (HY) -2000 + (ID) 850
Total energy: 1287.0 ( 4.93 by residue)
QMean score : 0.199
(partial model without unconserved sides chains):
PDB file :
Tito_3RTK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RTK-query.scw
PDB file :
Tito_Scwrl_3RTK.pdb
: