Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEVHFVGAGPGDKELITLKGYQLLKEADVVIYAGSLVNPELLEYCKASCEIHNSASMNLIEIIDCMEAGVTAGKEVVRLQTGDFSIYGSIREQVEEMKKRSIPFTCTPGVSSFLGAASSFGVEYTVPEVSQSVIITRMAGRTPVPSRESLRSYAAHQTSMVIFLSVQGIRKVVSELIKGGYKPETPAAVIYKATWAEEKKVTGTLEDIAEKVTEAGITKTALIMVGDFLGEEFYYSKLYDKDFKHEYR
2CBF Chain:A ((5-229))
--KLYIIGAGPGDPDLITVKGLKLLQQADVVLYADSLVSQDLIAKSKPGAEVLKTAGMHLEEMVGTMLDRMREGKMVVRVHTGDPAMYGAIMEQMVLLKREGVDIEIVPGVTSVFAAAAAAEAELTIPDLTQTVILTRAEGRTPVPEFEKLTDLAKHKCTIALFLSSTLTKKVMKEFINAGWSEDTPVVVVYKATWPDEKIVRTTVKDLDDAMRTNGIRKQAMILAG----------------------
General information:
TITO was launched using:
RESULT:
Template:
2CBF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -158001 for 1801 contacts (-87.7/contact) +
2D Compatibility (PS) -24409 + (NN) -9164 + (LL) 1688
1D Compatibility (HY) -22000 + (ID) 4750
Total energy: -216636.0 ( -120.29 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_2CBF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CBF-query.scw
PDB file :
Tito_Scwrl_2CBF.pdb
: