Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPQKMTEHIITQALRINASDVHIHPLSNRYLLRLRVNGTLIPLLYLPIDVGEKLISFLKFQAALDISEKRRPQSGSFEKNTNTEKIALRLSTMPSKDFHESMVIRIFRYKHPIPFLNS-SVFPRSTKQIQQQCKNQTGLFLFSGSTGSGKSSSMYSLASSIENKDELQIITIEDPVEHYSPGFLQIEVNEKASITYAPIIRSVLRHDPDILIIGEIRDAETAKIVIRAALTGHLVLSTVHAGDAYGVLLRLLEFGISSEELAQCLLGISFQKLTLLVCAFCGE------------KCHPL----------CTHLR-RKRTAIYEVLTKQDIKAYFQSNQQQIEPKYPIKRTFEKGVSYGFFSAY |
4KSR Chain:A ((27-371)) | ---KLINAMLGEAIKEGASDIHIETFEKTLSIRFRVDGVLREVLAPSRKLSSLLVSRVKVMAKLDIAEKRVPQDGRISL-----AVDVRVSTMPSS-HGERVVMRLLDK-----DLHSLGMTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQEL-NSSERNILTVEDPIEFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAVGAVTRLRDMGIEPFLISSSLLGVLAQRLVRTLCPDCKEPYEADKEQRKLF--EPLILYRATGCPKCNHKGYRGRTGIHELLLVDD---------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4KSR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -212756 for 2151 contacts (-98.9/contact) +
2D Compatibility (PS) -30895 + (NN) -1756 + (LL) 2712
1D Compatibility (HY) -22000 + (ID) 5600
Total energy: -270295.0 ( -125.66 by residue)
QMean score : 0.532
|
|
|