Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQKNDDLLRERRKDEHVALGVKQNEQLAPSSLKDIQLIGTSIPRYNVKDIDLTTTIFGKNVPFPFYINAMTGGS-RHTKKINAELAEIAREVAIPMAVGSQSAALKNSSLIDTYNIVREINPNGMILANVSPEVAIQDGLQAIEMLEANALQIHINPAQELVMQEGDRSFSHWLTRIEEYVKLSPVPIVVKEVGFGMTRETVKTLADIGVQTVDLAGKGGTNFAQIENDRRRDQAYDFLLDWGISTGQALIDMQHQDAPKIAYLASGGIRNPLDIIKALALGADSVGMAGQIIYSLKKEGVTKTIEKLELWKEQLRGLFVLANAKNIAELKTTPLIVSGELAKWGTLREINLVKLANRK |
1P0K Chain:A ((21-349)) | ------------------------RE---TGLDDITFVHVSLPDLALEQVDISTKIGELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSALKDPSERLSYEIVRKENPNGLIFANLGSEATAAQAKEAVEMIGANALQIHLNVIQEI--------FSGALKRIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGG---------------RQ-ISFFNSWGISTAASLAEIR-SEFPASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKALTDSGEEGLLEEIQLILEELKLIMTVLGARTIADLQKAPLVIKGETHHWLTERGVNTSSYSVR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P0K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194082 for 2697 contacts (-72.0/contact) +
2D Compatibility (PS) -33088 + (NN) -10617 + (LL) 3108
1D Compatibility (HY) -22000 + (ID) 6150
Total energy: -262829.0 ( -97.45 by residue)
QMean score : 0.608
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