Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGNYVALLRAVNVAGKNKVNMKNLKGALEEEGFQNVVTYIQSGNLVLSSILQTETEVAAKITKVIKAICELTIDVFVFSEQNYKQIIANNPFPPETIGEEERWMAAFYNENIDIPRQKNDQAEVIAIGRVLYVHVFSNQIHTLKLPVFLGQYKMALTTTRNWRTTLQLKTLLDSQE
2HIY Chain:A ((7-53))
---YALLVRGINVG-KNKVVMAELRQELTNLGLEKVESYINSGNIFFTSI------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2HIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13597 for 257 contacts (-52.9/contact) +
2D Compatibility (PS) -5116 + (NN) -1727 + (LL) 10840
1D Compatibility (HY) -6000 + (ID) 1050
Total energy: -16650.0 ( -64.79 by residue)
QMean score : 0.473
(partial model without unconserved sides chains):
PDB file :
Tito_2HIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HIY-query.scw
PDB file :
Tito_Scwrl_2HIY.pdb
: