Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKVVIIGGGIVGASAAYLLSKENVQVTLIDSDE-AGQATRAAAGIICPWLSKRRNKYWYELAKNSAAFYKELAETLEGDTGRDSGYKQVGVLALRQTEEKLAELFNLARERRLDAEVMGEVAKLSEAETKQRFPLVKSG-FGSVYVSGAARVNGGLFCETLLYAAKENGVKI--KAGRAHFSSDGEVVI------DGEKEHYDKLILATGAWLKDLLQDAGFQTDVLAQKGQLLELNFSEFQTDDWPV--ILPPSAKSIVPFDNGKIIVGATHEKAAGFNTEPTAEGKAEILTEVSQFMEGDLASKVAHVSVGTRPYTPDFTPIIGQLPGFESVFLANGLGASGLTTGPYVGRILADLALGNASDFVLENYEPSKYISR |
| 3IF9 Chain:A ((34-360)) | -----------------YYLAKENKNTALFESGTMGGRTTSAAAGMLSAHRECEERDAFFDFAMHSQRLYKGLGEELYALSGVDIRQHNGGMFKLAFSEEDVLQL------RQMDD--LDSVSWYSKEEVLEKEPYASGDIFGASFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSGDVWANH---VVVASGVWSGMFFKQLGLNNAFLPVKGECLSV-----WNDDIPLTKTLYHDACYIVPRKSGRLVVGATM-KPGDWSETPDLGGLESVMKKAKTMLPAIQNMKVDRFWAGLRPGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIM------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IF9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119683 for 2540 contacts (-47.1/contact) +
2D Compatibility (PS) -34015 + (NN) -10494 + (LL) 3384
1D Compatibility (HY) -18800 + (ID) 4500
Total energy: -184108.0 ( -72.48 by residue)
QMean score : 0.450
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