Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKKIRTVLGDISKESLGFTYSHEHLWCCPPSVQKDRDFELTDYESSLEELKTFQSIGGQTLVDASTLDYGRDGNKLKTMSEESGVNVLGVTGFNKHIYFPDWVQEESIEQITDRLIYDIEKGMDGSDARAGILKS-GSWYNLIHPLENKVTRAVAWAQKETGAPIWLHTEAGTMGQEMLAILEEEGVNMELVAVGHSDRNADPYYHLKLAEKGAYVQFDGCGKVKYYPDSTRVELVKNMLENGFGDKLLISGDMGRKSYLHAYGGGPGFRFIKTKFIPRLLEEGVTEQQIQTIFYDNPANWLAKF |
| 4LEF Chain:C ((3-291)) | -------------FDPTGYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQDAFFPEHVATRSVQELAQEMVDEIEQGIDGTELKAGIIAEIGTSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMGLEQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYPDEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKA-NGGYGYDYLLTTFIPQLRQSGFSQADVDVMLRENPSQFF--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LEF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84991 for 2566 contacts (-33.1/contact) +
2D Compatibility (PS) -31516 + (NN) -17111 + (LL) 1524
1D Compatibility (HY) -20800 + (ID) 4750
Total energy: -157644.0 ( -61.44 by residue)
QMean score : 0.485
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