Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYVSMKGMLERANKEHYAVMAINCFNLETARAVIDAAQELRAPIIIDLLQDHLTSHLGSRFLTKPIIKMAE------EASVEVAINLDHGHDVAIVKQCLADGFSSVMMDASSFPYEENVAITKKMVEFAEVYHASVEAEVGNIGAVTGDNYTNQEMYTDPKVAIDFAKRTGIDALAISYGSSHGDYPEGFTPAFQFDIVREIKSATNMPLVLHGGSGCGAENIRESVRLGINKINVGSDFMKAQVNQIKTNLKESPAV----NYVDLIHETIKAGTKAVKYYIHLSGSTGKSL |
| 4TO8 Chain:A ((4-274)) | --VSMKEMLIDAKENGYAVGQYNINNLEFTQAILEASQEENAPVILGVSEG--AARYMSGFYT--IVKMVEGLMHDLNITIPVAIHLDHGSSFEKCKEAIDAGFTSVMIDASHSPFEENVATTKKVVEYAHEKGVSVEAELGTVGG--DDVVADGIIYADPKECQELVEKTGIDALAPALGSVHG-------PKLGFKEMEEIGLSTGLPLVLHGGTGIPTKDIQKAIPFGTAKINVNTENQIASAKAVRDVLNNDKEVYDPRKYLGPAREAIKETVKG--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TO8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130249 for 2176 contacts (-59.9/contact) +
2D Compatibility (PS) -28003 + (NN) -11514 + (LL) 1408
1D Compatibility (HY) -18800 + (ID) 5300
Total energy: -192458.0 ( -88.45 by residue)
QMean score : 0.463
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