Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFMEKKHFDLNDVVEMKKPHPCGTNRFKIIRMGMDIRIKCEGCGHSVMIPRREFERKVKKILVKAEQE
1Q2B Chain:A ((218-242))
-------WEANSISEALTPHPCTT-------VGQEI---CEGCG------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Q2B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1516 for 63 contacts (-24.1/contact) +
2D Compatibility (PS) -2771 + (NN) 219 + (LL) 4188
1D Compatibility (HY) 3200 + (ID) 100
Total energy: 3220.0 ( 51.11 by residue)
QMean score : 0.299
(partial model without unconserved sides chains):
PDB file :
Tito_1Q2B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q2B-query.scw
PDB file :
Tito_Scwrl_1Q2B.pdb
: