Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFEKIETAYELILENIQTIENQLKTHIYDALIEQNSYYLGSSCDLDIVVVNNQKLRQLDLSQEEWRRTFQFIFIKSAQTEQLQANHQFTPDSIGFILLFLLEE-LTSQETVDVLEIGSGTGNLAQTLLN----NSSKELNYMGIEVDDLLIDLSASIAEIIGSSAQFIQEDAVRPQILKESDVIISDLPIGYYPNDDIAKRYAVSSSKEHTYAHHLLMEQSLKYLKKDGIAIFLAPENLLTSPQSDLLKEWLKGYADVIAVLTLPETIFGSRQNAKSIFVLKK-QAEQKP--ETFVYPLTDLQNRENMANFIENFQKWSRENSHYSKNMIE |
| 2F8L Chain:A ((81-341)) | -----------------------------------------------------------NFSNEEIRKGLQLALLKGMK-HGIQVNHQMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIEGIIKLPETLFKS-QARKSILILEKADVDVKPPKEVLLANLSSLTDPSVTAPILAEIENWFK----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164225 for 2012 contacts (-81.6/contact) +
2D Compatibility (PS) -27314 + (NN) -11447 + (LL) 5972
1D Compatibility (HY) -25200 + (ID) 4250
Total energy: -226464.0 ( -112.56 by residue)
QMean score : 0.532
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