Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFIIRKGKILALLIAFLVINQLVPILAVWLLKNHYQTPFTSILLIGLELLIIALFLYYAKVKQIIRWKALLTRKALVTIFLGWLSLRVPQIIGYLIMTMQGVKDTANQTVIMELTKQLPLALMLIFTIIGAPIMEEIIFRYIIPKELFAKHQKWGFVIGTLAFALIHSPSDIGSFIIYAGMGAILSFVYYKTEHLEYSIMVHFINNALAYSVLISTMMNN |
| 1DC1 Chain:A ((110-123)) | -------------------------------------------------------------------------------------------------------------------------------------FIDELIFRYLLFQGDSLGGTMRNIAGALAQQKLTRAIISALDIANIPYKWLDSRDKKYTNWMDKPEDDYELETFAKGISWTINGKHRT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DC1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3664 for 47 contacts (-78.0/contact) +
2D Compatibility (PS) -1553 + (NN) -828 + (LL) 14880
1D Compatibility (HY) -3200 + (ID) 250
Total energy: 5385.0 ( 114.57 by residue)
QMean score : -0.181
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