Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEKLLVPALNCLLGLLFLGDHWFLFRLQNGELFAIVTLILLCTTSFLINKNHPKNLTLISMII-TFLAVLSFLSTFLLA
4MND Chain:A ((280-310))
--------------------------------------------SAAIVNKVNPNQMTLISFLVGAFSALASFFS-----
General information:
TITO was launched using:
RESULT:
Template:
4MND.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4230 for 109 contacts (-38.8/contact) +
2D Compatibility (PS) -3012 + (NN) 438 + (LL) 5040
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -5964.0 ( -54.72 by residue)
QMean score : -0.162
(partial model without unconserved sides chains):
PDB file :
Tito_4MND.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MND-query.scw
PDB file :
Tito_Scwrl_4MND.pdb
: