Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKHTSKETKTKEAPMFIQMSIYAAILLVSQMISMLLPKSLPIPTTVIGLVLMYVLLTAKIIKVEWVDSFGALMIS--MIGFMFVPSGISVAANLDILKAEGLQLVAV------ITISTVVMLVVVAYVARLILAIRELSVTDLFKKILPNHYSKKVEEK
1E7P Chain:C ((25-103))
-------------------------------------------------------------KLDWWQSATGLFLGLFMIGHMFFVSTILLGDNVMLWVTKKFQLDFIFEGGKPIVVSFLAAFVFAVFIAHAFLAMRKFPINYRQYLTFKTHKDLMRHGD
General information:
TITO was launched using:
RESULT:
Template:
1E7P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24518 for 354 contacts (-69.3/contact) +
2D Compatibility (PS) -7393 + (NN) -4264 + (LL) 6440
1D Compatibility (HY) -10000 + (ID) 1050
Total energy: -40785.0 ( -115.21 by residue)
QMean score : -0.091
(partial model without unconserved sides chains):
PDB file :
Tito_1E7P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E7P-query.scw
PDB file :
Tito_Scwrl_1E7P.pdb
: