Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MELLKTPIFGICFSLILYTIGQHLFKKSKGFFLLQPLFFAMVSGIVILWLMSKGLGTDVKTFYTQAYKPGGDLIFWFLNPATIAFAVPLYKKNDVVKKYWVEILSSLVIGMIVSLMLIVAISKMVGLSQVGIASMLPQAATTAIALPITAAIGGNTAVTAMACILNAVIIYALGKKLVSFFHLNDSKIGAGLGLGTSGHTVGAAFALELGELQGAMAAIAVVVIGLVVDLVIPIFSHLIGLL |
| 2FKN Chain:A ((459-504)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------GSDAVGDWA-VLNALVNTAAGASWVSFHH------GGGVGMGYSLHAGMVAVADGSELADERLARVLTSDPGMGIIRHADAGYERAVEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FKN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13990 for 240 contacts (-58.3/contact) +
2D Compatibility (PS) -5140 + (NN) -1777 + (LL) 13924
1D Compatibility (HY) -2800 + (ID) 1050
Total energy: -10833.0 ( -45.14 by residue)
QMean score : 0.127
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