Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILRRRTIVLWQLGIAISLILSILALNLYFHSTPLQTNAALRNLAPSLNHLFGTDGLGRDMFVRTIKGLYFSLQVGLLGALMGVILATVFGVL-------AGLGNSIIDKIIAWLVDLFIGMPHLIFMI-LISF---VVGK--GAQGVIIATAVTHWPSLARLIRNEVYHLKNKEFVQLSKSMGKTPYYIVRHHILPLIASQIFIGFILLFPHVILHEASMTFLGFGLSAEQPSVGIILSEAAKHISLGNWWLVIFPGLYLILVVNAFDTIGESLKKLFYPQTDHF |
| 3DHW Chain:A ((10-140)) | -----------------------------------------------------------------VRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPTG-LIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVYLIQFAGD--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DHW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72046 for 684 contacts (-105.3/contact) +
2D Compatibility (PS) -11932 + (NN) 1695 + (LL) 8020
1D Compatibility (HY) -16000 + (ID) 1650
Total energy: -91913.0 ( -134.38 by residue)
QMean score : 0.104
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