Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVTVEKNRAVTFQANKELVSEAMTVLNKKNLTLSSALRLFL-QNVVVTNEVDLLTEEELEKEKLFKQFQAEISKNIEDVRQGKFYTSEEVRAELGL
1DXS Chain:A ((8-64))
----------------SLVS-FLTGLGCPN-----CIEYFTSQGLQSIYHLQNLTIEDLGALKIPEQYRMTIWRGLQDL-----------------
General information:
TITO was launched using:
RESULT:
Template:
1DXS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19281 for 364 contacts (-53.0/contact) +
2D Compatibility (PS) -5811 + (NN) -1845 + (LL) 3340
1D Compatibility (HY) -4000 + (ID) 800
Total energy: -28397.0 ( -78.01 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_1DXS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DXS-query.scw
PDB file :
Tito_Scwrl_1DXS.pdb
: