Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNINGIKLLSSRAVSKLGDVLYDYGNSTWIASMGGLGQKILGIYQIVELLVSIVLNPFGGALADRFQRRKILLITDAICAIMCFLLSFIGDDKVMVYGLIVANAILAVSNAFSSPAYKSYIPEIVDKADIITYNANLETIVQIISVSSPVLGFLIFNNFGIRITLIVDAITFLISFLFLYAIKVERVQLSKQEKVAIKNILADIADGFTYIKKEKEIMFFLIIAALLNTFLAMFNYLLPFTNSLLKTSGAYATILSISAIGSIIGALIARKIKSSINSMLSMLVFSSLGVIVMGFPSLFELPIWISYSGSFLFNSLLTMFNIHFFSQV |
| 1JQO Chain:A ((840-906)) | ---------------------------------------IAGLYD--ELLVAEELKPFGKQLRDKYVETQQLLLQ------IAGHKDILEGDPFLKQGLVLRNPYITTLNVFQAYTLKRIRDPNFKVTPQPPLSKEAGLVKLNPASEYPPGLEDTLILTMKGIAAGMQNTG------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JQO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24684 for 324 contacts (-76.2/contact) +
2D Compatibility (PS) -6794 + (NN) 743 + (LL) 17764
1D Compatibility (HY) -5200 + (ID) 1050
Total energy: -19221.0 ( -59.32 by residue)
QMean score : -0.108
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