Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLIKLKKIVQIERKPFFITRQKLKLFRIVFNIIFVLMLFYYWSAIPLLLPRLIVVIFLLGSIFLTNKAFIAIKKRIGKTLFIRERLWYILESLKLYDSDGDRILNTAILTFDISNDNAVTISAPLFGDKWTKRLKNLEDNLVAGLGLPLLSKKELPNCVIYQLGHIEEIEQYVFNNNLTRKFFQSISSPVIKLSNTQQFSLKSNTNIGVYGRTGTGKTIALQWFLFNALAKGCGTDD------------STYLGI--------VDGKGADLYALGKLLQEELGEQIAIGSSPQMLAKLSREFVDIMNARFEVIK---QNSSLNADAYDLEMTPNFLFV-DELASIRDSCGSSKQGKELWNEILQNLGLIARKGRQAGCHLLLSTQDPNAE--------NIPVELRNQISAVLYLGNPGADRLKMAFSMCELENVPTVSDRKGEALFHADGLNSIEPVLTIVPFVDVKTKQDFLQIVRNILPNY |
| 2IUT Chain:A ((219-411)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VAGTTGSGKSVGVNAMLLSILFKSTPSEARLIMIDPKMLELSIYEGIPHLLCPVVTDMKEAANALRWSVAEMERRYRLMAAMGVRNLAGFNRKVKDAEEAGTPLTDPLFRRESPDDEPPQLSTLPTIVVVVDEFADMMMIVG--KKVEEL-------IARIAQKARAAGIHLILATQRPSVDVITGLIKANIPTRIAFQVSSKIDSRTILDQGGAEQLLGHGDMLYLPPGTGLPIRVHGAFVSDDEVHRVVEAWKLRGAPDYIEDILAG------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IUT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31742 for 995 contacts (-31.9/contact) +
2D Compatibility (PS) -17859 + (NN) -8893 + (LL) 18716
1D Compatibility (HY) -4400 + (ID) 2500
Total energy: -46678.0 ( -46.91 by residue)
QMean score : 0.278
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