Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNLDILYCKLAMCTTLLTERLRLQPVDLSNINDFLEFSSDSETVFYMQRYKANTTEEAQMVLANVCMKSPLGIYAMIETESNKMIG-IIELEIRDEFSAEFGYILNKNYSGKGYMTEACSKLMSVGFEYLDLERIYARFDINNKKSGNVMERLGMKKEGELRHLAKNPKG-EWKTRAYYSILKEEYFNKVNTK
3FBU Chain:A ((5-168))
------------------AERLLIRKFEFKDWEAVHEYTSDSDVMKYIP--EGVFTEEDTRNFVNKNMG--AKNFPVILIGENILVGHIVFHKYFGEHTYEIGWVFNPKYFNKGYASEAAQATLKYGFKEMKLHRIIATCQPENTPSYRVMEKIGMRREGYFKKCI--PHGNEWWDEYYYAILEEE--------
General information:
TITO was launched using:
RESULT:
Template:
3FBU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73096 for 1175 contacts (-62.2/contact) +
2D Compatibility (PS) -16732 + (NN) -1805 + (LL) 2276
1D Compatibility (HY) -12000 + (ID) 2600
Total energy: -103957.0 ( -88.47 by residue)
QMean score : 0.410
(partial model without unconserved sides chains):
PDB file :
Tito_3FBU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FBU-query.scw
PDB file :
Tito_Scwrl_3FBU.pdb
: