Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSILDDYEKELLVISHQIIAYLIKSGVNPSQAQDVTQDVFLQILESD--FSLPLDKIKAWMYRTTIRRYIDLYRRNKRYNEILQKEFFI-------ENNLYYTESEKFFELHEAILHLKKDYQTLIDLYYFNDFSIKEISEITGQSQSTIKIRLMRARREVKKYLEKDNFKI
2Q1Z Chain:A ((37-183))
--------------APKVKGFLMKSGSVASQAEECAQDVMATVWQKAHLFDPSRASVATWIFTIARNRRIDGLRKDRQPEP---EDLFWGPDSEPDQADVYEMQQENA-RLGRAIARLPEAQRALIERAFFGDLTHRELAAETGLPLGTIKSRIRLALDRLRQHM-------
General information:
TITO was launched using:
RESULT:
Template:
2Q1Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20619 for 836 contacts (-24.7/contact) +
2D Compatibility (PS) -14795 + (NN) -4137 + (LL) 2564
1D Compatibility (HY) -5600 + (ID) 1750
Total energy: -44337.0 ( -53.03 by residue)
QMean score : 0.290
(partial model without unconserved sides chains):
PDB file :
Tito_2Q1Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q1Z-query.scw
PDB file :
Tito_Scwrl_2Q1Z.pdb
: