Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKECRDFYRQIQHTYNDIAVREDAVLSSILLSASNGLIKTSDVPRVAYELTQQLENNEIEKSFESLATVKELKKSAKKLSERYEQNKVTTGLLSKVFGNH
2QKW Chain:A ((29-89))
-----------------------DNVTSSQLLSVRHQLAESAGLPRDQHEFVSSQAPQSLRNRYNNLYSHTQRTLDMADMQHRYMTGASGINPGMLPHENV
General information:
TITO was launched using:
RESULT:
Template:
2QKW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 15464 for 285 contacts (54.3/contact) +
2D Compatibility (PS) -6411 + (NN) -4002 + (LL) 2064
1D Compatibility (HY) -1200 + (ID) 700
Total energy: 5215.0 ( 18.30 by residue)
QMean score : 0.150
(partial model without unconserved sides chains):
PDB file :
Tito_2QKW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QKW-query.scw
PDB file :
Tito_Scwrl_2QKW.pdb
: